SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05148

Signal sequence   MNKSMLIFFTILFLTYIIEEKEA

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPV1,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05148.cif

Structure  SPKB05148.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2795.38774

Aliphatic index  123.0434783

Isoelectric point  4.479430896

Charge (pH=7)   -0.998130814

Topological polar surface area  991.47

Aromaticity  0.173913043

Average rotatable bonds  4.130434783

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -1.9292

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.