SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05147

Signal sequence   MNKLTIIFFTILLLTYIIVEKEA

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPV0,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05147.cif

Structure  SPKB05147.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2727.38134

Aliphatic index  169.5652174

Isoelectric point  6.523989745

Charge (pH=7)   0.0000941

Topological polar surface area  954.17

Aromaticity  0.130434783

Average rotatable bonds  4

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -0.6531

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.