SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05145

Signal sequence   MKEAVKMSCLCIFVFLFLFSLTDA

Length  24

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPU8,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05145.cif

Structure  SPKB05145.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2757.41804

Aliphatic index  113.75

Isoelectric point  6.220594185

Charge (pH=7)   -0.124333593

Topological polar surface area  919.95

Aromaticity  0.166666667

Average rotatable bonds  3.791666667

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  36

X logP energy  -2.5695

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.