SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05144

Signal sequence   MKVFIAVLSIAIVLIIIVSIQETTA

Length  25

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPU7,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05144.cif

Structure  SPKB05144.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2686.37274

Aliphatic index  198.8

Isoelectric point  6.408795646

Charge (pH=7)   -0.000535612

Topological polar surface area  949.05

Aromaticity  0.04

Average rotatable bonds  3.6

Number of hydrogen bond donors  33

Number of hydrogen bond acceptors  34

X logP energy  -2.8666

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.