SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05143

Signal sequence   PPMTTE

Length  6

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPU6,

Motif  <1..6



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05143.cif

Structure  SPKB05143.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  674.76694

Aliphatic index  0

Isoelectric point  3.849983241

Charge (pH=7)   -1.000240578

Topological polar surface area  263.8

Aromaticity  0

Average rotatable bonds  3

Number of hydrogen bond donors  9

Number of hydrogen bond acceptors  11

X logP energy  -2.8673

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.