SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05141

Signal sequence   MGTSYRKLGYVLFLMLGMIVEEGIA

Length  25

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPU3,

Motif  1..25



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05141.cif

Structure  SPKB05141.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2792.40554

Aliphatic index  120.8

Isoelectric point  6.518693693

Charge (pH=7)   -0.000464629

Topological polar surface area  1005.16

Aromaticity  0.12

Average rotatable bonds  3.76

Number of hydrogen bond donors  36

Number of hydrogen bond acceptors  37

X logP energy  -3.93883

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.