SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05140

Signal sequence   MNFVIYGVIVVLTSQLYVDG

Length  20

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPU2,

Motif  1..20



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05140.cif

Structure  SPKB05140.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2230.64724

Aliphatic index  150.5

Isoelectric point  3.749986565

Charge (pH=7)   -1.003270045

Topological polar surface area  820.62

Aromaticity  0.15

Average rotatable bonds  3.5

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  29

X logP energy  -3.7822

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.