SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05139

Signal sequence   MNILLSSTLFVLLMFQIIGSGMG

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPU0,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05139.cif

Structure  SPKB05139.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2486.08394

Aliphatic index  148.2608696

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  870.62

Aromaticity  0.086956522

Average rotatable bonds  3.652173913

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  33

X logP energy  -4.7738

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.