SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05138

Signal sequence   MEKKIIFLVVLVALLALPEFISS

Length  23

Organism  Scolopendra dehaani (Thai centipede) (Scolopendra subspinipes dehaani)

UniProt ID  P0DPT6,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05138.cif

Structure  SPKB05138.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2574.24394

Aliphatic index  182.173913

Isoelectric point  6.530759447

Charge (pH=7)   0.000944477

Topological polar surface area  861.83

Aromaticity  0.086956522

Average rotatable bonds  3.739130435

Number of hydrogen bond donors  29

Number of hydrogen bond acceptors  31

X logP energy  0.1574

Hydropathy 



Literature Information


Title  Venomic and transcriptomic analysis of centipede Scolopendra subspinipes dehaani.

DOI  10.1021/pr300881d,

Publication Year  2012

PubMed ID  23148443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.