SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05137

Signal sequence   MKLKRLMAALTFVAAGVGAASAVA

Length  24

Organism  Pseudomonas aeruginosa

UniProt ID  P0DMR4,

Motif  1..24



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  4OMB,

Predicted Structure ID  SPKB05137.cif

Structure  SPKB05137.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2347.90624

Aliphatic index  118.3333333

Isoelectric point  11.82305527

Charge (pH=7)   2.99739092

Topological polar surface area  887.02

Aromaticity  0.041666667

Average rotatable bonds  3.25

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  32

X logP energy  -7.27973

Hydropathy 



Literature Information


Title  Structure-function aspects of PstS in multi-drug-resistant Pseudomonas aeruginosa.

DOI  10.1371/journal.ppat.0040043,

Publication Year  2008

PubMed ID  18282104,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.