SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05135

Signal sequence   MQGPTLAVLGALLAVAVS

Length  18

Organism  Bovine herpesvirus 1.1 (strain P8-2) (BoHV-1) (Infectious bovine rhinotracheitis virus)

UniProt ID  P0CK29,

Motif  1..18



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05135.cif

Structure  SPKB05135.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1711.09294

Aliphatic index  157.2222222

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  632.78

Aromaticity  0

Average rotatable bonds  2.944444444

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  23

X logP energy  -4.9674

Hydropathy 



Literature Information


Title  Molecular cloning, sequencing, and expression of functional bovine herpesvirus 1 glycoprotein gIV in transfected bovine cells.

DOI  10.1128/JVI.64.10.5132-5142.1990,

Publication Year  1990

PubMed ID  2168991,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.