SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05126

Signal sequence   MRYIRLCIISLLATLPLAVHA

Length  21

Organism  Escherichia coli

UniProt ID  P0A9Z7,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  3D4F,

Predicted Structure ID  SPKB05126.cif

Structure  SPKB05126.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2367.98294

Aliphatic index  176.6666667

Isoelectric point  9.501216221

Charge (pH=7)   2.026061638

Topological polar surface area  849.7

Aromaticity  0.047619048

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  30

X logP energy  -2.81836

Hydropathy 



Literature Information


Title  Single amino acid substitution between SHV-1 beta-lactamase and cefotaxime-hydrolyzing SHV-2 enzyme.

DOI  10.1016/0014-5793(88)80734-8,

Publication Year  1988

PubMed ID  3129309,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.