SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05107

Signal sequence   MVNRRDLIKWSAVALGAGAGLAGPAPAAHA

Length  30

Organism  Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)

UniProt ID  P07883,

Motif  1..30



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05107.cif

Structure  SPKB05107.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2942.43484

Aliphatic index  101.3333333

Isoelectric point  11.47971465

Charge (pH=7)   2.089038218

Topological polar surface area  1184.55

Aromaticity  0.033333333

Average rotatable bonds  3.033333333

Number of hydrogen bond donors  41

Number of hydrogen bond acceptors  39

X logP energy  -11.88816

Hydropathy 



Literature Information


Title  The agarase gene (dagA) of Streptomyces coelicolor A3(2): nucleotide sequence and transcriptional analysis.

DOI  10.1007/BF00329843,

Publication Year  1987

PubMed ID  17165236,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.