SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05084

Signal sequence   MRALAFAAALAAFSATAALA

Length  20

Organism  Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) (Methylobacterium extorquens)

UniProt ID  P04172,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05084.cif

Structure  SPKB05084.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1909.27684

Aliphatic index  113.5

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  718.58

Aromaticity  0.1

Average rotatable bonds  2.9

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  25

X logP energy  -6.15843

Hydropathy 



Literature Information


Title  The primary structures of Pseudomonas AM1 amicyanin and pseudoazurin. Two new sequence classes of blue copper proteins.

DOI  10.1042/bj2320451,

Publication Year  1985

PubMed ID  4091802,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.