SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05083

Signal sequence   MMIFRALIAAATLAIAIATTLPAAA

Length  25

Organism  Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) (Methylobacterium extorquens)

UniProt ID  P04171,

Motif  1..25



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05083.cif

Structure  SPKB05083.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2487.10034

Aliphatic index  149.2

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  875.52

Aromaticity  0.04

Average rotatable bonds  3.08

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  32

X logP energy  -4.78403

Hydropathy 



Literature Information


Title  The primary structures of Pseudomonas AM1 amicyanin and pseudoazurin. Two new sequence classes of blue copper proteins.

DOI  10.1042/bj2320451,

Publication Year  1985

PubMed ID  4091802,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.