SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB05023

Signal sequence   MRALGFIGIILSIFSSFAYA

Length  20

Organism  Aquifex aeolicus (strain VF5)

UniProt ID  O66515,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB05023.cif

Structure  SPKB05023.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2177.63234

Aliphatic index  132

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  759.04

Aromaticity  0.2

Average rotatable bonds  3.45

Number of hydrogen bond donors  28

Number of hydrogen bond acceptors  27

X logP energy  -3.12173

Hydropathy 



Literature Information


Title  Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35 A.

DOI  10.1126/science.1101952,

Publication Year  2004

PubMed ID  15361618,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.