SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04958

Signal sequence   MEKKTVAALSFLFIVLFVAQEIAVTEA

Length  27

Organism  Lens culinaris subsp. culinaris (Cultivated lentil) (Lens esculenta)

UniProt ID  B3F051,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04958.cif

Structure  SPKB04958.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2969.57284

Aliphatic index  133.7037037

Isoelectric point  4.47943233

Charge (pH=7)   -0.9972804

Topological polar surface area  1087.64

Aromaticity  0.111111111

Average rotatable bonds  3.666666667

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  38

X logP energy  -4.6899

Hydropathy 



Literature Information


Title  A novel defensin from the lentil Lens culinaris seeds.

DOI  10.1016/j.bbrc.2008.04.161,

Publication Year  2008

PubMed ID  18468512,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.