SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04952

Signal sequence   MDLSTKKVISAGLVFIYALSLAMLVPMFLA

Length  30

Organism  Acidianus ambivalens (Desulfurolobus ambivalens)

UniProt ID  B1GT61,

Motif  1..30



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell wall

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04952.cif

Structure  SPKB04952.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3244.05554

Aliphatic index  146.3333333

Isoelectric point  9.256043355

Charge (pH=7)   0.996990302

Topological polar surface area  1088.92

Aromaticity  0.1

Average rotatable bonds  3.533333333

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  42

X logP energy  -3.2051

Hydropathy 



Literature Information


Title  Acidianus, Sulfolobus and Metallosphaera surface layers: structure, composition and gene expression.

DOI  10.1111/j.1365-2958.2009.06746.x,

Publication Year  2009

PubMed ID  19522740,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.