SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04934

Signal sequence   MKRNILAVLIPALLAAGAANA

Length  21

Organism  Erwinia amylovora (Fire blight bacteria)

UniProt ID  A0RZH5,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04934.cif

Structure  SPKB04934.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2091.58624

Aliphatic index  158.5714286

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  810.63

Aromaticity  0

Average rotatable bonds  3.238095238

Number of hydrogen bond donors  27

Number of hydrogen bond acceptors  27

X logP energy  -5.80003

Hydropathy 



Literature Information


Title  Porin isolated from the outer membrane of Erwinia amylovora and its encoding gene.

DOI  10.1007/s00284-006-0368-z,

Publication Year  2007

PubMed ID  17211539,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.