SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04933

Signal sequence   CVVLVMCMVVIAPMAEG

Length  17

Organism  Lens culinaris (Lentil) (Cicer lens)

UniProt ID  A0AT33,

Motif  <1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04933.cif

Structure  SPKB04933.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1765.29414

Aliphatic index  142.9411765

Isoelectric point  3.849941048

Charge (pH=7)   -1.12419001

Topological polar surface area  557.43

Aromaticity  0

Average rotatable bonds  3.235294118

Number of hydrogen bond donors  20

Number of hydrogen bond acceptors  24

X logP energy  -1.3116

Hydropathy 



Literature Information


Title  Purification and primary structure of novel lipid transfer proteins from germinated lentil (Lens culinaris) seeds.

DOI  10.1134/s0006297907040104,

Publication Year  2007

PubMed ID  17511608,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.