SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04925

Signal sequence   MGRIIFVSFGLLVVFLSLSGTGA

Length  23

Organism  Macrovipera lebetinus (Levantine viper) (Vipera lebetina)

UniProt ID  W5XCJ6,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04925.cif

Structure  SPKB04925.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2384.90544

Aliphatic index  143.9130435

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  846.34

Aromaticity  0.130434783

Average rotatable bonds  3.347826087

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -5.04383

Hydropathy 



Literature Information


Title  Lebecin, a new C-type lectin like protein from Macrovipera lebetina venom with anti-tumor activity against the breast cancer cell line MDA-MB231.

DOI  10.1016/j.toxicon.2014.04.010,

Publication Year  2014

PubMed ID  24814013,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.