SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04868

Signal sequence   MTRHCVLLVWALLALLSLGAA

Length  21

Organism  Camelus dromedarius (Dromedary) (Arabian camel)

UniProt ID  Q9GK12,

Motif  1..21



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04868.cif

Structure  SPKB04868.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2251.81984

Aliphatic index  176.6666667

Isoelectric point  8.557478416

Charge (pH=7)   1.026915363

Topological polar surface area  792.15

Aromaticity  0.047619048

Average rotatable bonds  3.380952381

Number of hydrogen bond donors  30

Number of hydrogen bond acceptors  28

X logP energy  -2.55093

Hydropathy 



Literature Information


Title  Expression of the peptidoglycan recognition protein, PGRP, in the lactating mammary gland.

DOI  10.3168/jds.S0022-0302(04)73392-5,

Publication Year  2004

PubMed ID  15328291,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.