SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04866

Signal sequence   MFAKAVAVSLLTLASAQVFA

Length  20

Organism  Pseudomonas putida (Arthrobacter siderocapsulatus)

UniProt ID  Q9F646,

Motif  1..20



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04866.cif

Structure  SPKB04866.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2038.47614

Aliphatic index  132

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  746.02

Aromaticity  0.1

Average rotatable bonds  3.25

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  27

X logP energy  -5.1664

Hydropathy 



Literature Information


Title  Electron transfer from quinohemoprotein alcohol dehydrogenase to blue copper protein azurin in the alcohol oxidase respiratory chain of Pseudomonas putida HK5.

DOI  10.1021/bi990121f,

Publication Year  1999

PubMed ID  10320337,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.