SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04865

Signal sequence   MKVRCVSLVAAGLLTIAGSAIGQPAPAPMPAMAPAAKP

Length  38

Organism  Ideonella dechloratans

UniProt ID  Q9F437,

Motif  1..38



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04865.cif

Structure  SPKB04865.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3658.49844

Aliphatic index  100.5263158

Isoelectric point  10.79319833

Charge (pH=7)   2.935416204

Topological polar surface area  1305

Aromaticity  0

Average rotatable bonds  2.894736842

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  50

X logP energy  -11.99393

Hydropathy 



Literature Information


Title  Chlorite dismutase from Ideonella dechloratans.

DOI  10.1007/s007750100237,

Publication Year  2001

PubMed ID  11472023,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.