SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04857

Signal sequence   MKLNKLAIATLVSAALSQYAFA

Length  22

Organism  Vibrio alginolyticus

UniProt ID  Q99PX1,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04857.cif

Structure  SPKB04857.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2324.80704

Aliphatic index  129.0909091

Isoelectric point  10.24760792

Charge (pH=7)   1.996543817

Topological polar surface area  893.56

Aromaticity  0.090909091

Average rotatable bonds  3.5

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  32

X logP energy  -6.7066

Hydropathy 



Literature Information


Title  Cloning and sequencing of the deacetylase gene from Vibrio alginolyticus H-8.

DOI  10.1016/s1389-1723(01)80041-4,

Publication Year  2000

PubMed ID  16232910,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.