SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04838

Signal sequence   MKVFPALTSALVALGTAGVEAEHVQRSL

Length  28

Organism  Phytophthora sojae (Soybean stem and root rot agent) (Phytophthora megasperma f. sp. glycines)

UniProt ID  Q945U0,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04838.cif

Structure  SPKB04838.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2896.39794

Aliphatic index  115

Isoelectric point  7.550711068

Charge (pH=7)   0.092145291

Topological polar surface area  1155.44

Aromaticity  0.035714286

Average rotatable bonds  3.357142857

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  40

X logP energy  -10.74003

Hydropathy 



Literature Information


Title  Molecular cloning and characterization of glucanase inhibitor proteins: coevolution of a counterdefense mechanism by plant pathogens.

DOI  10.1105/tpc.002253,

Publication Year  2002

PubMed ID  12084830,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.