SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04833

Signal sequence   METVLILCSLLAPVVLA

Length  17

Organism  Rattus norvegicus (Rat)

UniProt ID  Q91XV6,

Motif  1..17



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04833.cif

Structure  SPKB04833.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1785.27394

Aliphatic index  200.5882353

Isoelectric point  3.849962145

Charge (pH=7)   -1.062215294

Topological polar surface area  597.89

Aromaticity  0

Average rotatable bonds  3.294117647

Number of hydrogen bond donors  21

Number of hydrogen bond acceptors  23

X logP energy  -1.1335

Hydropathy 



Literature Information


Title  Peptidomics for Studying Limited Proteolysis.

DOI  10.1021/acs.jproteome.5b00820,

Publication Year  2015

PubMed ID  26479776,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.