SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04754

Signal sequence   MAKAVMMLPVLLSFLLLPFSSMA

Length  23

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q6ZBZ2,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04754.cif

Structure  SPKB04754.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2511.23894

Aliphatic index  140

Isoelectric point  9.700002532

Charge (pH=7)   0.997689266

Topological polar surface area  772.65

Aromaticity  0.086956522

Average rotatable bonds  3.47826087

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  32

X logP energy  -0.6717

Hydropathy 



Literature Information


Title  Proteomic analysis of rice leaf, stem and root tissues during growth course.

DOI  10.1002/pmic.200600043,

Publication Year  2006

PubMed ID  16758443,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.