SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04742

Signal sequence   MRTLWIMAVLLVVVEG

Length  16

Organism  Trimeresurus stejnegeri (Chinese green tree viper) (Viridovipera stejnegeri)

UniProt ID  Q6H3D5,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04742.cif

Structure  SPKB04742.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1830.32044

Aliphatic index  176.25

Isoelectric point  6.410149741

Charge (pH=7)   -0.000243889

Topological polar surface area  635.04

Aromaticity  0.0625

Average rotatable bonds  3.6875

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  22

X logP energy  -0.13093

Hydropathy 



Literature Information


Title  Venom phospholipases A2 of bamboo viper (Trimeresurus stejnegeri): molecular characterization, geographic variations and evidence of multiple ancestries.

DOI  10.1042/BJ20030818,

Publication Year  2004

PubMed ID  12959640,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.