SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04737

Signal sequence   MKYLLPSAAAGLLLLAAQPTMA

Length  22

Organism  Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)

UniProt ID  Q6CZT4,

Motif  1..22



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04737.cif

Structure  SPKB04737.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2244.77904

Aliphatic index  133.6363636

Isoelectric point  9.298300651

Charge (pH=7)   0.996838851

Topological polar surface area  786.64

Aromaticity  0.045454545

Average rotatable bonds  3.181818182

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  30

X logP energy  -4.159

Hydropathy 



Literature Information


Title  Characterization of the Erwinia carotovora pelA gene and its product pectate lyase A.

DOI  10.1016/0378-1119(88)90590-2,

Publication Year  1988

PubMed ID  3371662,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.