SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04736

Signal sequence   MSKFHKTISRRDFMKGLGLAGAGIGAVAASAPVFHDIDELVSS

Length  43

Organism  Dehalococcoides mccartyi (strain VS)

UniProt ID  Q69GM4,

Motif  1..43



Activity Information


Pathway  NA

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  NA



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04736.cif

Structure  SPKB04736.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  4489.19034

Aliphatic index  88.60465116

Isoelectric point  9.442553733

Charge (pH=7)   1.182025332

Topological polar surface area  1806.53

Aromaticity  0.069767442

Average rotatable bonds  3.488372093

Number of hydrogen bond donors  64

Number of hydrogen bond acceptors  63

X logP energy  -18.50226

Hydropathy 



Literature Information


Title  Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distribution.

DOI  10.1128/AEM.70.8.4880-4888.2004,

Publication Year  2004

PubMed ID  15294827,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.