SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04697

Signal sequence   MGLVHALLPFAAAAALLLLAAPPPATA

Length  27

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q53NL5,

Motif  1..27



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04697.cif

Structure  SPKB04697.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2582.18574

Aliphatic index  148.8888889

Isoelectric point  7.550323994

Charge (pH=7)   0.08889339

Topological polar surface area  833.67

Aromaticity  0.037037037

Average rotatable bonds  2.666666667

Number of hydrogen bond donors  26

Number of hydrogen bond acceptors  31

X logP energy  -2.8206

Hydropathy 



Literature Information


Title  Purification and characterization of a XIP-type endoxylanase inhibitor from rice (Oryza sativa).

DOI  10.1080/14756360400002080,

Publication Year  2005

PubMed ID  15895691,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.