SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04654

Signal sequence   MFSLTQILTFLLVAITLMTFSSA

Length  23

Organism  Caenorhabditis elegans

UniProt ID  Q18184,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04654.cif

Structure  SPKB04654.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2549.12194

Aliphatic index  140

Isoelectric point  6.099999998

Charge (pH=7)   -0.002015701

Topological polar surface area  888.22

Aromaticity  0.130434783

Average rotatable bonds  3.565217391

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  34

X logP energy  -4.9177

Hydropathy 



Literature Information


Title  Identification of new members of the (short) neuropeptide F family in locusts and Caenorhabditis elegans.

DOI  10.1111/j.1749-6632.2008.03624.x,

Publication Year  2009

PubMed ID  19456328,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.