SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04649

Signal sequence   MAAATVGVLLRLLLLPVVVVVSLLVGASRA

Length  30

Organism  Oryza sativa subsp. japonica (Rice)

UniProt ID  Q10NX8,

Motif  1..30



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04649.cif

Structure  SPKB04649.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3001.79484

Aliphatic index  198

Isoelectric point  12.50010931

Charge (pH=7)   1.997977677

Topological polar surface area  1082.92

Aromaticity  0

Average rotatable bonds  3.2

Number of hydrogen bond donors  39

Number of hydrogen bond acceptors  37

X logP energy  -5.41216

Hydropathy 



Literature Information


Title  Purification and characterization of extracellular beta-galactosidase secreted by supension cultured rice (Oryza sativa L.) cells.

DOI  10.1271/bbb.67.627,

Publication Year  2003

PubMed ID  12723614,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.