SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04639

Signal sequence   MRKVISMLLVVAMLTTIFAAMIPQTVSA

Length  28

Organism  Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)

UniProt ID  Q06851,

Motif  1..28



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell surface

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04639.cif

Structure  SPKB04639.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3036.84494

Aliphatic index  139.2857143

Isoelectric point  11.65177567

Charge (pH=7)   1.997685954

Topological polar surface area  1072.39

Aromaticity  0.035714286

Average rotatable bonds  3.571428571

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  41

X logP energy  -5.98583

Hydropathy 



Literature Information


Title  Sequencing of a Clostridium thermocellum gene (cipA) encoding the cellulosomal SL-protein reveals an unusual degree of internal homology.

DOI  10.1111/j.1365-2958.1993.tb01576.x,

Publication Year  1993

PubMed ID  8316083,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.