SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04626

Signal sequence   MRLVNSLGRRKILLILAVIVAFSTVLLFAKLWGRKTSSTLDEVGSKTHGDLTAEN

Length  55

Organism  Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (Clostridium thermocellum)

UniProt ID  Q02934,

Motif  1..55



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04626.cif

Structure  SPKB04626.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  6041.15204

Aliphatic index  125.8181818

Isoelectric point  11.17862633

Charge (pH=7)   4.092143223

Topological polar surface area  2468.55

Aromaticity  0.054545455

Average rotatable bonds  3.763636364

Number of hydrogen bond donors  90

Number of hydrogen bond acceptors  82

X logP energy  -22.14532

Hydropathy 



Literature Information


Title  Gene sequence and properties of CelI, a family E endoglucanase from Clostridium thermocellum.

DOI  10.1099/00221287-139-2-307,

Publication Year  1993

PubMed ID  8436949,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.