SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04555

Signal sequence   MAKFASIIALLFAALVLFAAFEAPTMVEA

Length  29

Organism  Raphanus sativus (Radish) (Raphanus raphanistrum var. sativus)

UniProt ID  P69241,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04555.cif

Structure  SPKB04555.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3057.74274

Aliphatic index  131.7241379

Isoelectric point  4.258147297

Charge (pH=7)   -0.998760489

Topological polar surface area  1010.41

Aromaticity  0.137931034

Average rotatable bonds  3.310344828

Number of hydrogen bond donors  34

Number of hydrogen bond acceptors  37

X logP energy  -2.0447

Hydropathy 



Literature Information


Title  Analysis of two novel classes of plant antifungal proteins from radish (Raphanus sativus L.) seeds.

DOI  NA,

Publication Year  1992

PubMed ID  1639777,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.