SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04488

Signal sequence   MMKNNVDRIVSIVTALIMIFGASLFSPPIRVFA

Length  33

Organism  Thermoanaerobacterium saccharolyticum

UniProt ID  P36917,

Motif  1..33



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04488.cif

Structure  SPKB04488.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3652.47574

Aliphatic index  126.969697

Isoelectric point  11.47969964

Charge (pH=7)   1.998129127

Topological polar surface area  1331.16

Aromaticity  0.090909091

Average rotatable bonds  3.575757576

Number of hydrogen bond donors  46

Number of hydrogen bond acceptors  47

X logP energy  -8.21176

Hydropathy 



Literature Information


Title  Gene cloning, sequencing, and biochemical characterization of endoxylanase from Thermoanaerobacterium saccharolyticum B6A-RI.

DOI  10.1128/aem.59.9.3134-3137.1993,

Publication Year  1993

PubMed ID  8215382,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.