SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04477

Signal sequence   MTQFNIPVTMSSSLSIILVILVSLRTALS

Length  29

Organism  Phaseolus vulgaris (Kidney bean) (French bean)

UniProt ID  P35334,

Motif  1..29



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04477.cif

Structure  SPKB04477.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3135.81144

Aliphatic index  154.4827586

Isoelectric point  10.55000222

Charge (pH=7)   0.997980988

Topological polar surface area  1199.48

Aromaticity  0.034482759

Average rotatable bonds  3.551724138

Number of hydrogen bond donors  43

Number of hydrogen bond acceptors  44

X logP energy  -10.86903

Hydropathy 



Literature Information


Title  Cloning and characterization of the gene encoding the endopolygalacturonase-inhibiting protein (PGIP) of Phaseolus vulgaris L.

DOI  10.1046/j.1365-313x.1992.t01-35-00999.x,

Publication Year  1992

PubMed ID  1303801,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.