SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04424

Signal sequence   MKIYLVAAIAWILFQSSSWTTDA

Length  23

Organism  Dianthus caryophyllus (Carnation) (Clove pink)

UniProt ID  P24476,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04424.cif

Structure  SPKB04424.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2616.06984

Aliphatic index  114.7826087

Isoelectric point  6.330585692

Charge (pH=7)   -0.002714665

Topological polar surface area  962.89

Aromaticity  0.173913043

Average rotatable bonds  3.52173913

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  34

X logP energy  -4.9702

Hydropathy 



Literature Information


Title  A new class of anti-HIV agents: GAP31, DAPs 30 and 32.

DOI  10.1016/0014-5793(91)81122-o,

Publication Year  1991

PubMed ID  1936243,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.