SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04392

Signal sequence   MRTLWIMAVLLVGVEG

Length  16

Organism  Craspedocephalus gramineus (Bamboo pit viper) (Trimeresurus gramineus)

UniProt ID  P20476,

Motif  1..16



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04392.cif

Structure  SPKB04392.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  1788.23974

Aliphatic index  158.125

Isoelectric point  6.410149741

Charge (pH=7)   -0.000243889

Topological polar surface area  635.04

Aromaticity  0.0625

Average rotatable bonds  3.625

Number of hydrogen bond donors  23

Number of hydrogen bond acceptors  22

X logP energy  -1.15553

Hydropathy 



Literature Information


Title  Amino acid sequence of a phospholipase A2 from the venom of Trimeresurus gramineus (green habu snake).

DOI  10.1016/0041-0101(91)90100-6,

Publication Year  1991

PubMed ID  2048135,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.