SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04390

Signal sequence   MARTVVALNILVLLGLCWSLAVA

Length  23

Organism  Rattus norvegicus (Rat)

UniProt ID  P20059,

Motif  1..23



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04390.cif

Structure  SPKB04390.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2427.04774

Aliphatic index  186.5217391

Isoelectric point  8.549912035

Charge (pH=7)   0.936006272

Topological polar surface area  864.76

Aromaticity  0.043478261

Average rotatable bonds  3.347826087

Number of hydrogen bond donors  32

Number of hydrogen bond acceptors  30

X logP energy  -3.35973

Hydropathy 



Literature Information


Title  N-terminal amino acid sequences of the hemopexins from chicken, rat and rabbit.

DOI  10.1016/s0006-291x(88)80540-0,

Publication Year  1988

PubMed ID  3421961,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.