SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04389

Signal sequence   MNHRYTLLALAAAALSAGAHA

Length  21

Organism  Ralstonia solanacearum (Pseudomonas solanacearum)

UniProt ID  P20041,

Motif  1..21



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04389.cif

Structure  SPKB04389.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2123.46054

Aliphatic index  112.3809524

Isoelectric point  9.353535051

Charge (pH=7)   1.178948756

Topological polar surface area  868.36

Aromaticity  0.047619048

Average rotatable bonds  3.142857143

Number of hydrogen bond donors  31

Number of hydrogen bond acceptors  30

X logP energy  -8.78593

Hydropathy 



Literature Information


Title  DNA sequence analysis of pglA and mechanism of export of its polygalacturonase product from Pseudomonas solanacearum.

DOI  10.1128/jb.172.7.3879-3887.1990,

Publication Year  1990

PubMed ID  2193922,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.