SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04388

Signal sequence   MAFKSLLSFVSVIGALQGANAALTRR

Length  26

Organism  Trametes versicolor (White-rot fungus) (Coriolus versicolor)

UniProt ID  P20013,

Motif  1..26



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04388.cif

Structure  SPKB04388.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2722.24434

Aliphatic index  116.5384615

Isoelectric point  12.51647815

Charge (pH=7)   2.997682643

Topological polar surface area  1107.74

Aromaticity  0.076923077

Average rotatable bonds  3.5

Number of hydrogen bond donors  40

Number of hydrogen bond acceptors  37

X logP energy  -11.18426

Hydropathy 



Literature Information


Title  Trametes versicolor ligninase: isozyme sequence homology and substrate specificity.

DOI  10.1016/0014-5793(89)81258-x,

Publication Year  1989

PubMed ID  2707445,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.