SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04352

Signal sequence   MARKDVASMFAAALFIGAFAAVPTSVQS

Length  28

Organism  Hordeum vulgare (Barley)

UniProt ID  P15737,

Motif  1..28



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04352.cif

Structure  SPKB04352.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2858.36644

Aliphatic index  87.5

Isoelectric point  9.695024739

Charge (pH=7)   0.998132438

Topological polar surface area  1089.46

Aromaticity  0.107142857

Average rotatable bonds  3.214285714

Number of hydrogen bond donors  38

Number of hydrogen bond acceptors  39

X logP energy  -10.43063

Hydropathy 



Literature Information


Title  Purification of (1-->3)-beta-glucan endohydrolase isoenzyme II from germinated barley and determination of its primary structure from a cDNA clone.

DOI  10.1007/BF00027333,

Publication Year  1989

PubMed ID  2562758,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.