SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04351

Signal sequence   MKKFIKILKVLSMAIVLSACNINGIFA

Length  27

Organism  Paraclostridium sordellii (Clostridium sordellii)

UniProt ID  P15698,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Extracellular environment

Secretion efficiency  NA

Type  Sec/SPII



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04351.cif

Structure  SPKB04351.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2966.78154

Aliphatic index  148.1481481

Isoelectric point  10.80483506

Charge (pH=7)   3.934829448

Topological polar surface area  1050.64

Aromaticity  0.074074074

Average rotatable bonds  3.851851852

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  39

X logP energy  -4.4522

Hydropathy 



Literature Information


Title  Cloning, sequencing and expression of a sialidase gene from Clostridium sordellii G12.

DOI  10.1099/00221287-135-11-3087,

Publication Year  1989

PubMed ID  2693593,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.