SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04343

Signal sequence   MSRFVTSVSALAMLALAPAALSSVAYA

Length  27

Organism  Methylobacterium organophilum

UniProt ID  P15279,

Motif  1..27



Activity Information


Pathway  Sec

Natural/Artificial  Natural

Subcellular location  Cell membrane

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04343.cif

Structure  SPKB04343.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2699.21914

Aliphatic index  119.6296296

Isoelectric point  9.348807885

Charge (pH=7)   0.997130574

Topological polar surface area  1014.64

Aromaticity  0.074074074

Average rotatable bonds  3.074074074

Number of hydrogen bond donors  37

Number of hydrogen bond acceptors  38

X logP energy  -9.87633

Hydropathy 



Literature Information


Title  Nucleotide sequence and transcriptional start site of the Methylobacterium organophilum XX methanol dehydrogenase structural gene.

DOI  10.1128/jb.170.10.4739-4747.1988,

Publication Year  1988

PubMed ID  2459109,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.