SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04321

Signal sequence   MSLSRREFVKLCSAGVAGLGISQIYHPGIVHA

Length  32

Organism  Desulfomicrobium baculatum (Desulfovibrio baculatus)

UniProt ID  P13063,

Motif  1..32



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04321.cif

Structure  SPKB04321.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  3398.00444

Aliphatic index  109.6875

Isoelectric point  9.44938233

Charge (pH=7)   2.118450817

Topological polar surface area  1345.35

Aromaticity  0.0625

Average rotatable bonds  3.46875

Number of hydrogen bond donors  49

Number of hydrogen bond acceptors  47

X logP energy  -12.67626

Hydropathy 



Literature Information


Title  Identification of three classes of hydrogenase in the genus, Desulfovibrio.

DOI  10.1016/0006-291x(87)90376-7,

Publication Year  1987

PubMed ID  3322275,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.