SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04320

Signal sequence   MRIAVGLGKEGGEERLERQGISRRDFMKFCTAVAVAMGMGPAFATDVAA

Length  49

Organism  Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB)

UniProt ID  P13061,

Motif  1..49



Activity Information


Pathway  Tat

Natural/Artificial  Natural

Subcellular location  Periplasmic space

Secretion efficiency  NA

Type  Tat/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04320.cif

Structure  SPKB04320.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  5203.07664

Aliphatic index  71.83673469

Isoelectric point  8.540168599

Charge (pH=7)   0.943396419

Topological polar surface area  2140.45

Aromaticity  0.06122449

Average rotatable bonds  3.612244898

Number of hydrogen bond donors  77

Number of hydrogen bond acceptors  72

X logP energy  -21.76505

Hydropathy 



Literature Information


Title  Identification of three classes of hydrogenase in the genus, Desulfovibrio.

DOI  10.1016/0006-291x(87)90376-7,

Publication Year  1987

PubMed ID  3322275,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.