SPKB

Signal Peptide Knowledge Base

General Information


SPKB ID  SPKB04296

Signal sequence   MYCTHLMTLQLVVMAMLWVTPVRA

Length  24

Organism  Oncorhynchus keta (Chum salmon) (Salmo keta)

UniProt ID  P10257,

Motif  1..24



Activity Information


Pathway  SRP-dependent

Natural/Artificial  Natural

Subcellular location  ER

Secretion efficiency  NA

Type  Sec/SPI



Structure Information


PDB ID  NA,

Predicted Structure ID  SPKB04296.cif

Structure  SPKB04296.cif
Very high (pLDDT > 90)
Confident (90 > pLDDT > 70)
Low (70 > pLDDT > 50)
Very low (pLDDT < 50)
Loading PAE…
Expected Position Error (Ångströms)


Physicochemical Information


Molecular weight  2808.53054

Aliphatic index  121.6666667

Isoelectric point  8.534796248

Charge (pH=7)   1.026064949

Topological polar surface area  954.21

Aromaticity  0.083333333

Average rotatable bonds  3.625

Number of hydrogen bond donors  35

Number of hydrogen bond acceptors  37

X logP energy  -2.84543

Hydropathy 



Literature Information


Title  The complete amino acid sequences of beta-subunits of two distinct chum salmon GTHs.

DOI  10.1016/0016-6480(88)90273-0,

Publication Year  1988

PubMed ID  3192067,

Patent ID  NA,



Faculty of Applied Sciences, Macao Polytechnic University, Macao, China.